Plant Syst Evol
DOI 10.1007/s00606-014-1063-3
ORIGINAL ARTICLE
Sibbaldia: a molecular phylogenetic study of a remarkably
polyphyletic genus in Rosaceae
Torsten Eriksson • Magnus Lundberg •
Mats Töpel • Pia Östensson • Jenny E. E. Smedmark
Received: 6 January 2014 / Accepted: 14 April 2014
Springer-Verlag Wien 2014
Abstract Using DNA sequence data from nuclear ribosomal
ITS in combination with plastid trnLF spacer and trnL intron
data, we show that Sibbaldia is a polyphyletic assemblage. It
falls into five separate clades of Potentilleae, three within
Fragariinae and two within Potentilla (Potentillinae sensu
Soják). To a large extent, our results are congruent with Soják’s
findings based on morphological characters such as anther
structure. Four of the Sibbaldia species included in this study
remain in Sibbaldia, while S. adpressa is classified in Sibbaldianthe, S. perpusilloides is considered to represent a new
genus in Fragariinae, Chamaecallis Smedmark, S. micropetala
is nested within the Potentilla anserina clade, and four species
belong to a basal clade of Potentilla. The phylogenetic affinity
of Sibbaldiopsis is still unsettled, but one of the three species
that have been classified in the genus is found to belong inside
Sibbaldia, and it should be named Sibbaldia retusa (O.F.
T. Eriksson
Bergius Foundation, Royal Swedish Academy of Sciences,
Box 50017, 10405 Stockholm, Sweden
Present Address:
T. Eriksson (&)
The Natural History Collections, University of Bergen,
P.O. Box 7800, 5020 Bergen, Norway
e-mail: torsten.eriksson@adm.uib.no
M. Lundberg P. Östensson
Department of Botany, Stockholm University,
10691 Stockholm, Sweden
M. Töpel
Department of Biological and Environmental Sciences,
Gothenburg University, Box 461, 40530 Göteborg, Sweden
J. E. E. Smedmark
University Museum of Bergen, The Natural History Collections,
University of Bergen, P.O. Box 7800, 5020 Bergen, Norway
Müller) T. Erikss. Further study will show whether the
remaining two species, Potentilla cuneifolia and P. miyabei,
are more closely related to Sibbaldia, Sibbaldianthe, or if they
make up a distinct lineage separate from either of these.
Keywords Bayesian inference Phylogeny Polyphyly
Potentilla Sibbaldia Taxonomy
Introduction
Sibbaldia constitutes a rather small group of species in the rose
family (Rosaceae), found mostly in mountain regions of the
Old World, particularly in Asia. The most widely known and
widely distributed species, Sibbaldia procumbens, is circumboreal. Although more than 40 names at the species level have
been published (see ‘‘List of taxa’’), recent treatments list ca.
10–15 species (Dixit and Panigrahi 1981; Rajput et al. 1997;
Dikshit and Panigrahi 1998; Li et al. 2003), or even as little as
two (Soják 2008). Sibbaldia has been classified in Potentilleae
within Rosoideae, close to Potentilla, and recent phylogenetic
analyses using DNA sequence data have confirmed this position (Eriksson et al. 1998, 2003; Potter et al. 2007; Lundberg
et al. 2009; Dobeš and Paule 2010).
The species that have been referred to Sibbaldia are
mostly small-flowered perennials with yellow, white or
purple flowers, including cushion plants of high altitudes in
the Himalayas. The leaves are typically trifoliate or pinnate,
although there is considerable variation among the species.
The consistent diagnosing characteristic is ‘‘fewer’’ stamens
than Potentilla (i.e. ten or less). Linnaeus described the first
species of Sibbaldia and based his system mainly on pistil
and stamen number (and position). There was no problem at
the time in distinguishing his two species of Sibbaldia from
Potentilla by their fewer stamens (Linnaeus 1753, 1754).
123
T. Eriksson et al.
However, as additional species referred to these and other
close genera were discovered and described, this simple and
technical distinction was blurred. Still, the distinction
between these genera was commonly maintained based on
the artificial ‘‘fewer stamens’’ character (e.g. Nestler 1816;
Seringe 1825; Bunge 1829; Endlicher 1840; Focke 1888;
Rydberg 1898, 1908; Wolf 1908; Muravjova 1936; Chatterjee 1938; Juzepchuk 1941; Hutchinson 1964; Dixit and Panigrahi 1981; Rajput et al. 1997; Dikshit and Panigrahi 1998).
Some authors raised doubts as to the rationale for keeping
Sibbaldia separate (Bentham 1858; Wolf 1908), and in a few
cases, Sibbaldia has been joined with Potentilla (e.g. Spenner
1829; Hooker 1865, 1878).
When species referred to Sibbaldia in recent revisions
and floras (Dixit and Panigrahi 1981; Rajput et al. 1997;
Dikshit and Panigrahi 1998; Li et al. 2003) are compared
even superficially, one is immediately struck by the variation
in general characteristics such as leaf form and division,
stamen number, stamen placement, anther form, presence or
absence of a floral disc and flower colour. In addition, there
are indications that the lower stamen numbers in Sibbaldia
species may have been reduced in parallel, mainly because
the position of the stamens in relation to petals and sepals is
inconsistent. A few species traditionally classified in Sibbaldia have from time to time been moved into separate
genera (Endlicher 1840; Juzepchuk 1941), but despite the
morphological heterogeneity of the genus, it is not until
recently that its circumscription has been seriously questioned (Soják 2008). There have been indications based on
DNA sequence data that the genus may not be monophyletic
(Lundberg et al. 2009; Dobeš and Paule 2010), but as previous phylogenetic analyses have only included one or a few
Sibbaldia species, we wanted to test the monophyly of the
genus in the light of its morphological variation.
In a recent study, Soják (2008) investigated two morphological characters for all of Potentilleae. One of his
conclusions was that these two characters, the number and
structure of thecae in anthers and the position of styles on
achenes, divided the Sibbaldia species, and he suggested
that some of them should be included in Potentilla, but not
all. A secondary goal for this study then was to test the
classification suggested by Soják (2008) using a molecular
phylogeny. While discussing the species in this paper, we
will initially use the names in the most recent floras and
revisions, i.e. as classified in Sibbaldia.
Materials and methods
Taxon sampling
The intention was to sample as many species of Sibbaldia
in a wide sense as possible, along with representatives from
123
all genera in Potentilleae. For rooting purposes, three outgroup taxa, Rosa majalis, Sanguisorba officinalis and
Aremonia agrimonioides, were selected to represent the
two clades most close to Potentilleae (Eriksson et al. 2003).
All sampled taxa are listed in Table 1.
For the in-group, we selected two or more species of
each genus and attempted to use type species. When possible, we selected species that have been resolved in early
splits in their respective ‘‘genus clade’’ in previous analyses. We also favoured diploids over polyploids where
possible. From Potentilla, we sampled six species from
subgenus Fragariastrum (Heister ex Fabr.) Reichenb.
because their leaves and flower colours were reminiscent of
some Sibbaldia species and an additional seven species
representing early splits in the Potentilla clade (Töpel et al.
2011). In total, we selected 43 in-group species plus three
outgroup species. Two Sibbaldia species were only available to us as type collections, and for this reason, we were
unable to extract DNA from S. trullifolia and S. tenuis.
Sequencing
Two DNA regions were sequenced. Their utility has been
assessed for Potentilleae in previous studies (Eriksson et al.
1998, 2003; Gehrke et al. 2008; Lundberg et al. 2009), and
they were well known to be relatively easy to amplify, even
from old herbarium collections. We used nuclear ribosomal
internal transcribed spacers (ITS) and one region of plastid
DNA comprising the spacer between the trnL and trnF
genes, as well as an intron in the trnL gene (trnLF).
The ribosomal DNA is known to be affected by concerted evolution, but the level of homogenisation differs
between groups. We did not perform any cloning to confirm that only a single repeat type was present. However,
we sequenced different PCR products in tests, both using
the same DNA extraction and different DNA extractions.
In rare cases, we noted double signal for single bases, but
low-quality sequences caused by low-quality DNA after
extracting old herbarium specimens were more of a problem. For this reason, we had to try different accessions in
several species before getting good enough sequences.
When comparing such partial reads, we found no evidence
of different repeat types and the different accessions gave
the same sequence for the parts we could read.
We used ca. 0.05 g of silica-dried or herbarium plant
material that was homogenised in CTAB using a minibeadbeater and silica beads. Extraction of total genomic
DNA followed a downscaled version of the protocol
described by Doyle and Doyle (1990). Polymerase chain
reactions (PCR) using Taq DNA polymerase (Roche
Applied Science, Germany) and amplification conditions
were as described in Lundberg et al. (2009). We used the
ITS-I (Urbatsch et al. 2000) and ITS4 (White et al. 1990)
Sibbaldia: a molecular phylogenetic study
Table 1 List of species and sequences used, along with voucher specimens, sequence database accession numbers and literature references to
original publication of sequence
Species
Vouchers
ITS accessions
trnLF
accessions
References
Alchemilla alpina
R. Eriksson s.n. (GH, S)
U90816,
U90817
AJ512217
Eriksson et al. (1998, 2003)
Alchemilla cryptantha
Eriksson 914 (S)
FJ356153
FJ422306
Lundberg et al. (2009)
Aremonia agrimonioides
Karlsson 94076 (LD)
U90799
AJ512230,
AJ512231
Eriksson et al. (1998, 2003)
Chamaerhodos erecta
Lackschewitz 11453 (GH), Norlindh
and Ahti 10161A (S)
U90794
AJ512219
Eriksson et al. (1998, 2003)
Chamaerhodos mongolica
E. Rosenius 1028 (S)
FJ356155
FJ422285
Lundberg et al. (2009)
Comarum palustre
Comarum salesovianum
Eriksson 659 (GH, S)
Eriksson and Vretblad TE751 (S)
AJ511777
AJ511779
AJ512237
AJ512228
Eriksson et al. (2003)
Eriksson et al. (2003)
Dasiphora fruticosa
Karlsson 94074 (LD), Eriksson 806 (S)
U90808,
U90809
AJ512233
Eriksson et al. (1998, 2003)
Drymocallis agrimonioides
Laferrière 2357 (A), Lundberg 15 (S)
U90787
FJ422289
Eriksson et al. (1998);
Lundberg et al. (2009)
Drymocallis rupestris
Lundberg 6 (S)
FJ356163
FJ422321
Lundberg et al. (2009)
Fragaria vesca
Eriksson and Smedmark 43 (S)
AJ511771
AJ512232
Eriksson et al. (2003)
Fragaria viridis
Lundberg 16 (S)
FJ356166
FJ422295
Lundberg et al. (2009)
Potaninia mongolica
Potentilla alba
Norlindh and Ahti 10384 (S)
Töpel MA122 (GB)
AM286742
FN430774
AM286743
FN556397
Potter et al. (2007)
Töpel et al. (2011)
Potentilla alchemilloides
Anderberg and Anderberg 26 (S)
FJ356168
FJ422297
Lundberg et al. (2009)
Potentilla anserina
Eriksson and Smedmark 44 (S)
AJ511773
AJ512238
Eriksson et al. (2003)
Potentilla biflora
Viereck 5042 (S)
KJ396292/TE
KJ396304/TE
This study
Potentilla cuneifolia
Lundberg 39 (S)
FJ356169
FJ422298
Lundberg et al. (2009)
Potentilla curviseta
Stewart Aug. 16, 1922 (S)
KJ396293/ML
KJ396305/ML
This study
Potentilla dickinsii
Sun et al. s.n. (A), Crompton et al. 139
(E)
U90785
AJ512243
Eriksson et al. (1998, 2003)
Potentilla divina
Soják 17 VII 1984 (S)
KJ396294/ML
KJ396306/ML
This study
Potentilla fragarioides
Eriksson s.n. (S)
FN555610
AJ512226
Töpel et al. (2011); Eriksson
et al. (2003)
Potentilla lignosa
Töpel MA132 (GB)
FJ356171
FJ422299
Lundberg et al. (2009)
Potentilla micrantha
Karlsson 94075 (LD), Eriksson and
Smedmark 42
U90812,
U90813
AJ512227
Eriksson et al. (1998, 2003)
Potentilla nitida
GBG Bot Gard. no voucher
KJ396295/TE
KJ396307/TE
This study
Potentilla peduncularis
Eriksson and Vretblad TE758 (S)
AJ511778
AJ512239
Eriksson et al. (2003)
Potentilla recta
No voucher
FN430784
FN556419
Töpel et al. (2011)
Potentilla reptans
Eriksson 650 (GH, S), Eriksson 822 (S)
U90784
AJ512241
Eriksson et al. (1998, 2003)
Potentilla stenophylla
Eriksson and Vretblad TE763 (S)
AJ511780
AJ512240
Eriksson et al. (2003)
Potentilla stipularis
Petrovsky 28.VI.1975 (S)
KJ396296/ML
KJ396308/ML
This study
Potentilla valderia
Rosa majalis
Lundberg 32 (S)
Eriksson 641 (GH, S)
KJ396297/ML
U90801
KJ396309/ML
AJ512229
This study
Eriksson et al. (1998, 2003)
Sanguisorba officinalis
Helfgott Ben-5 (TEX)
AF183533,
AF183556
AJ416465
Helfgott et al. (2000)
Sibbaldia adpressa
(Sibbaldianthe adpressa)
Gusev 391 (S)
FJ356176
FJ422304
Lundberg et al. (2009)
Sibbaldia cuneata
Binns 5 (E)
FJ356173
FJ422301
Lundberg et al. (2009)
Sibbaldia micropetala
(Potentilla micropetala)
Ludlow et al. 16237 (S)
KJ396298/PÖ
KJ396310/PÖ/
ML
This study
Sibbaldia parviflora
Lundberg 4 (S)
FJ356174
FJ422302
Lundberg et al. (2009)
Sibbaldia pentaphylla
(Potentilla clandestina)
Smith 11205 (S)
KJ396299/PÖ
KJ396311/PÖ
This study
123
T. Eriksson et al.
Table 1 continued
Species
Vouchers
ITS accessions
trnLF
accessions
References
Sibbaldia perpusilloides
Forrest 16456 (S), Forrest 26836 (S)
KJ396300/ML
KJ396312/ML
This study
Sibbaldia procumbens
Aronsson s.n. (S), Eriksson 698 (S)
U90820,
U90821
AJ512235
Eriksson et al. (1998, 2003)
Sibbaldia purpurea (Potentilla
purpurea)
Ludlow et al. 20749 (S)
KJ396301/PÖ
KJ396313/PÖ
This study
Sibbaldia semiglabra
Klackenberg 820621-11 (S)
FJ356175
FJ422303
Lundberg et al. (2009)
Sibbaldia sikkimensis
(Potentilla sikkimensis)
Rock 16987 (S)
KJ396302/PÖ
KJ396314/PÖ
This study
Sibbaldia tetrandra (Potentilla
tetrandra)
Ahlgren s.n. (S)
KJ396303/PÖ/
ML
KJ396315/PÖ
This study
Sibbaldianthe bifurca
Karis 412 (S), Eriksson 811 (S)
U90786
AJ512224
Eriksson et al. (1998, 2003)
Sibbaldiopsis tridentata
(Sibbaldia retusa)
Hill 17146 (A), Eriksson and Smedmark
40 (S)
U90791
AJ512236
Eriksson et al. (1998, 2003)
(Chamaecallis perpusilloides)
New species names are in parentheses. In cases where two voucher specimens or references are listed, the first concerns ITS and the second
trnLF. Herbarium abbreviations follow Holmgren et al. (1990)
primers to amplify the ITS region. Some problematical taxa
were necessary to amplify in two parts using also the
‘‘internal’’ primers ITS2 (White et al. 1990) and ITS3B
(Baum et al. 1994). For amplification of the trnLF region of
plastid DNA, the trnL(c) and trnL(f) primers were used
(Taberlet et al. 1991). Problematic taxa were amplified in
two parts with the additional primers trnL(d) and trnL(e).
Primers used were obtained from MWG Biotech AG, Germany. For taxa that did not amplify with Taq polymerase,
the high-fidelity and proofreading Phusion DNA polymerase
(Finnzymes, Finland) was used. PCR set-up and amplification conditions using Phusion were the same as described by
Lundberg et al. (2009). Amplification products were cleaned
using MultiScreen PCR plates for DNA clean-up (Millipore,
Ireland). Sequencing reactions, conditions for producing
extensions, precipitation and visualisation were also the
same as described in Lundberg et al. (2009). BigDye version
3.1 (Applied Biosystems) was used for sequencing reactions,
and the primers used for amplification were used for
sequencing as well. Sequences were assembled and proofread using the Staden package (Staden 1996). All DNA
sequences have been deposited in EMBL.
Alignment of DNA sequences
We used Prank (Löytynoja and Goldman 2005, 2008) with the
-F option for sequence alignment of the two data sets, with
subsequent manual adjustments in SeAl (Rambaut 2002).
Manual adjustments were particularly important for the plastid
data set. Data matrices are available from the first author.
123
Phylogenetic estimation
We tested molecular models for each of the two data sets
by using mrAIC (Nylander 2004) which uses PHYML
(Guindon and Gascuel 2003) as a maximum-likelihood
back end. Phylogenies were estimated using Bayesian
inference (Yang and Rannala 1997) in MrBayes 3.1.2
(Huelsenbeck and Ronquist 2001; Ronquist and Huelsenbeck 2003). Each of the data sets as well as the combined
was run for 10 million generations, sampling every 100
generations. Settings were nruns = 2 and nchains = 4, and
we used the models suggested by the AICc criterion (Akaike Information Criterion with small sample correction;
Sugiura 1978; Hurvich and Tsai 1989), namely the general
time-reversible model (GTR; Tavaré 1986) with gamma
distribution of rates (GTR ? G; Yang 1993). In the combined analysis, each data set was allowed to estimate its
own model parameters, i.e. the model parameters (except
the topology) were unlinked. The analyses started with
default priors and a randomly generated default topology.
The log files from the MrBayes runs and the output from
the sump command were studied for information on analysis convergence and if the chains could be assumed to
have reached stationarity. We also checked chain stationarity using the plot output from the web interface of
AWTY (Nylander et al. 2008). Fifty percent of burnin
(50,000 trees) was removed from each analysis prior to
computing majority rule consensus trees, by using the sumt
command. Hence, the tree in Fig. 1 is based on 100,002
trees.
Sibbaldia: a molecular phylogenetic study
Results
In addition to data that have been published elsewhere
(Eriksson et al. 2003; Lundberg et al. 2009; Töpel et al.
2011), this study includes new ITS and trnLF sequences
from six additional Sibbaldia species and seven additional
Potentilla species. The matrices consisted of 46 taxa, with
675 and 1,425 aligned characters in the ITS and trnLF data
sets, respectively. The Prank alignment program performed
reasonably well on the ITS data, but not on the trnLF data,
and that alignment had to be extensively corrected, in
particular in regions with large indels. The GTR ? G
model was preferred for both data partitions. For the
combined data set, the amount of indels and unsequenced
parts was 28 % of a total of 96,600 aligned positions; the
scored uncertainties (bad signal, high noise level or double
peaks) were 0.3 %; the G ? C content is 43 %.
The phylogenetic analyses in MrBayes performed well for
all data sets. The chain swap acceptance rates were 22–36 %
(zero for one of the chains in the separate trnLF analysis), the
model parameter acceptance rates were 11–47 %, and the
average standard deviation of split frequencies did not exceed
0.003 at the end of the runs. The potential scale reduction
factors of the parameters were 1.000 (1.001 for four parameters
in the combined analysis). The AWTY convergence plots
indicated that the chains had reached stationarity.
The separate phylogenies (not shown) both divide the
Potentilleae into two clades: the Fragariinae and Potentilla
(Potentillinae sensu Soják 2008). The two markers show a
different resolving power. ITS is less resolved than trnLF,
in particular at the base of the Potentilla clade. Comparing
the analyses of the separate markers reveals four more or
less well-supported differences, two in Fragariinae and two
in the Potentilla clade. In Fragariinae, the conflicts are the
same as two conflicts noted by Lundberg et al. (2009),
namely Potentilla cuneifolia shifting sister group relationships and in the other case, Drymocallis, Dasiphora
and Chamaerhodos showing different interrelationships. In
the Potentilla clade, one conflict results in Potentilla
dickinsii and P. reptans exchanging sister group relations,
and the other concerns the entire Anserina clade (Potentilla
sect. Anserina sensu Soják 2007, including P. lignosa). The
latter clade shifts between being sister to Potentilla (trnLF)
and being sister to Fragariinae (ITS, with slightly lower
support). Except for these conflicts, the trees are congruent,
and since none of the discrepancies affect the position of
any Sibbaldia species or the monophyly of any clade
classified to genus (except for the Anserina clade which
might be considered a genus of it own), we will mainly
report results from the combined analysis here.
The combined analysis (Fig. 1) showed the same main
tree structure as previous analyses comprising Potentilleae
(Eriksson et al. 2003; Potter et al. 2007; Lundberg et al.
2009). In the Fragariinae, a basal split divides the clade into
one subclade comprising Fragaria as sister to a clade of
Dasiphora, Potaninia, Drymocallis and Chamaerhodos.
The other Fragariinae clade consists of Alchemilla in the
wide sense (cf. Gehrke et al. 2008) with two species of
Comarum (or Comarum and Farinopsis) as unresolved
sisters, and the Sibbaldianthe clade weakly supported as
sister to one Sibbaldia clade. (Details discussed below.)
For Potentilla (sister clade to Fragariinae), the Anserina
clade plus Potentilla (Tylosperma) lignosa is sister to the
rest of Potentilla. The latter clade would contain almost all
species of Potentilla, but the sample here is focused on a
few clades of Potentilla that represent early splits (‘‘basal’’
clades). We can identify three well-supported clades here,
but the support for relationships among them is weak: the
Potentilla alba clade (subgen. Fragariastrum with two
yellow-flowered species as sister clade), one Sibbaldia
clade and a clade containing most Potentilla species
including the type species P. reptans.
Three of the discrepancies between the plastid and
nuclear trees mentioned above were resolved in favour of
the plastid tree resolution in the combined analysis, all with
the same or slightly increased level of support. The clade
containing Dasiphora and others (C in Fig. 1) was well
supported (pp 1.0) as sister to Fragaria like in both of the
separate trees, and the relationships within clade C were
resolved as in the ITS phylogeny with slightly increased
levels of support in the combined analysis.
The analysed Sibbaldia species did not form a clade.
Rather, they fell into five separate clades, two of which are
relatively larger, namely the Sibbaldia sensu stricto clade
in Fragariinae (A in Fig. 1, four accessions), and one clade
of Himalayan species which is found within the Potentilla
clade (D in Fig. 1, four accessions). The Himalayan clade
is strongly supported to be within Potentilla, but very
weakly supported (pp 0.59) as sister to a clade containing
Potentilla subgen. Fragariastrum. In addition, three species
in our Sibbaldia sample are resolved in three separate
clades. The first two in Fragariinae and the third in
Potentilla: Sibbaldia adpressa is sister to Sibbaldianthe
bifurca (clade B in Fig. 1), Sibbaldia perpusilloides is for
all practical purposes unresolved in a trichotomy at the
base of the Dasiphora clade (C in Fig. 1), and Sibbaldia
micropetala is found within Potentilla sect. Anserina (E in
Fig. 1). The position of all five Sibbaldia instances is very
well supported and not affected by any incongruencies
between plastid and nuclear ribosomal data.
Discussion
Our results agree with previously published phylogenies
that included more than just a few species from Rosoideae
123
T. Eriksson et al.
123
Sibbaldia: a molecular phylogenetic study
b Fig. 1 Majority-rule consensus tree (50 %) based on 100,002 trees
sampled after burnin in the Bayesian inference analysis in MrBayes
3.1.2. Estimated posterior probabilities for clades are noted at each
node. Five clades including species that are or have been classified in
Sibbaldia are indicated with grey and the capital letters A–E. Clade A
corresponds to Sibbaldia in the strict sense. Species names in bold are
current names. The circumscription of the Fragariinae and Potentilla
(Potentillinae sensu Soják 2008) clades is indicated to the right.
Branches are drawn proportional to the mean estimated branch
lengths, with a scale bar at the base
(Eriksson et al. 1998, 2003; Potter et al. 2007; Lundberg
et al. 2009; Dobeš and Paule 2010). The Potentilleae clade
is split into two main clades (Fig. 1). One is Fragariinae,
containing a number of small or large genera: Alchemilla
(incl. Aphanes and Lachemilla), Chamaerhodos, Comarum
(possibly including Farinopsis), Dasiphora, Drymocallis,
Fragaria, Potaninia, Sibbaldia, Sibbaldianthe, Sibbaldiopsis, as well as a few former Potentilla species which
have only recently been classified in other genera (Lundberg et al. 2009; Paule and Soják 2009; Soják 2008). The
other clade is Potentilla, which contains some subclades
that often have been treated as genera, such as Duchesnea
and Horkelia. Potentilla has also been classified as Potentillinae (Soják 2008).
There is also morphological support for this division of
Potentilleae into two clades. Soják (2008) made a detailed
description of characters that support this split (primarily
anther structure). He had previously published a brief
account of his finding, but unfortunately in a publication
which was not widespread enough that the anther structure
character was acknowledged (Soják 1989). Based on the
results presented in this study, anthers with thecae that are
confluent at the apex (and in some cases also at the base)
are a synapomorphy for Fragariinae, and this character is
also congruent with the results from previous phylogenetic
studies based on plastid spacer and intron data, as well as a
combination of seven DNA markers from both the plastid
and nuclear genomes (Potter et al. 2007; Lundberg et al.
2009; Dobeš and Paule 2010).
All species in Potentilleae are characterised by having
styles that are not apically placed on the achene. In the
phylogenetic hypothesis presented here (Fig. 1), the
Anserina clade, which has styles with a lateral insertion, is
the sister group of Potentilla s.str. with subterminal styles,
rather than with Fragariinae with lateral-to-basal styles.
The results from the molecular analyses are, however, not
unambiguous. Some data (notably nuclear ribosomal ITS)
favour that the Anserina clade instead is sister to Fragariinae (Töpel et al. 2011). The style insertion character may
be regarded as supporting the latter position, as well as for
classifying the species in the Anserina clade in genera
separate from Potentilla, as has been suggested previously
(Hill 1756; Rydberg 1898; Soják 2010). Should this latter
topology stabilise as more data are added, this would imply
that lateral-to-basal styles are a synapomorphy for Fragariinae plus the Anserina clade. Else, a lateral-to-basal
insertion of the style is the plesiomorphic condition in
Potentilleae, and subterminal styles have evolved in
Potentilla s.str. At present, in the light of conflicting data,
we consider it premature to follow Soják’s (2010) classification and prefer to leave the species in the Anserina
clade in Potentilla for the time being. Apart from the
conflicting topologies based on different genetic markers,
the relationships within the Anserina clade have not been
properly addressed. For example, Potentilla micropetala is
nested inside the Anserina clade in our tree (Fig. 1), but it
is classified separately in Piletophyllym by Soják (2010).
Although the morphological characters discussed by
Soják (2008) are congruent with the estimated phylogeny,
his preferred subtribal classification was not. He divided
Potentilleae into four subtribes: Potentillinae, Fragariinae,
Chamaerhodotinae and Alchemillinae. The first two were
based on his anther structure and style position characters,
but the latter two were based on special cases of the anther
character, Chamaerhodos with a single lateral theca and
Alchemilla with a single ‘‘ventral’’ theca. The molecular
phylogeny shows Chamaerhodotinae and Alchemillinae to
be in-groups in Fragariinae, which is not unexpected
(Eriksson et al. 1998, 2003; Dobeš and Paule 2010) since
they both have lateral-to-basal styles. If Alchemillinae and
Chamaerhodotinae would just be treated as clade names
with the understanding that they are subclades of Fragariinae, we think that the names might not necessarily cause
confusion, but in a more formal (ICBN) sense, the use of
Chamaerhodotinae and Alchemillinae as subtribes alongside Potentillinae and Fragariinae would be unfortunate. It
would result, for example, in the closest relatives of Alchemillinae being nested well within Fragariinae, and some
(but not all) members of Fragariinae would have their
closest relatives in Alchemillinae. We suggest that it might
be best not to use the subtribes Alchemillinae and Chamaerhodotinae in the sense of Soják (2008).
The phylogeny presented here is based on two molecular
DNA sequence regions, the nuclear ribosomal internal
transcribed spacers (ITS) and a plastid DNA region that
includes the spacer between the trnL and trnF genes, and
an intron in the trnL gene. Our results are fully congruent
with to those of Lundberg et al. (2009) although in that
study, two additional regions were added (a part of nuclear
ribosomal ETS and the plastid trnS–G spacer region).
Much of the Sibbaldia collections are fairly old, and in
many cases, we had access only to herbarium material. For
this reason, we decided to only use two regions even
though some species were available also for the two extra
regions. For much of the important species, it was simply
too difficult to get sequences for any but the most easily
123
T. Eriksson et al.
amplified regions. When considering the resolution and
support in the combined tree, it is clear that for the purpose
of studying the monophyly of Sibbaldia, it was sufficient to
use only these two regions.
Lundberg et al. (2009) specifically studied incongruencies between nuclear and plastid phylogenies in this group
in order to find potential occurrences of reticulate evolution, such as allopolyploidy. They found a number of such
cases of incongruence, and some of those were also seen in
our trees when data were analysed and compared separately (not shown). However, species classified as Sibbaldia were not involved in these incongruencies, and we
chose to combine the data sets into a joint analysis, keeping
incongruencies from the separate tree in mind when
studying the results. We believe that for the purpose of
studying the monophyly (or non-monophyly) of Sibbaldia
sensu lato, the combined tree may be trusted because it is
not in conflict with the separate trees.
Below, we discuss the details of the five Sibbaldia
clades in our combined tree (Fig. 1), along with the taxonomic and nomenclatural implications.
Clade A in Fragariinae: Sibbaldia sensu stricto
The Fragariinae clade A includes Sibbaldia procumbens,
which may be considered the type species of Sibbaldia.
Smith (1811) published a previously unpublished account
of Linnaeus’ trip to Lapland. It contains a brief description
of Sibbaldia procumbens as ‘‘Jussiea’’, and Smith comments in a footnote ‘‘… in this and many following
instances, the original names in the manuscript are here
retained, as a matter of curiosity to the learned botanist,
who will be interested in seeing to whom Linnaeus
extemporaneously dedicated his new genera as they
occurred…’’. Although Farr et al. (1979) consider this a
split of Sibbaldia, leaving Sibbaldia erecta as type for
Sibbaldia, it is clear that neither Linnaeus (since he had
clearly reconsidered the name after writing this manuscript
and published the genus as ‘‘Sibbaldia’’ including the
species mentioned) nor Smith (since he explicitly considered the name preliminary and published only as a curiosity) accept the genus Jussiea when it was published.
Under article 34 of the International Code of Botanical
Nomenclature, Jussiea was therefore not validly published.
When describing Chamaerhodos, Bunge (1829) included three species from Sibbaldia, namely C. erecta, C.
altaica and C. grandiflora. Of the original species described in Sibbaldia by Linnaeus (1753), only S. procumbens
remained then, and Rydberg (1908) explicitly noted S.
procumbens as type species. The clade A therefore is the
clade that should be used to circumscribe the genus Sibbaldia, and for this reason, we call this clade ‘‘Sibbaldia
sensu stricto’’.
123
Soják (2008) was of the opinion that Sibbaldia only
comprised two species: S. procumbens in a wide sense
(including S. cuneata, S. parviflora and S. semiglabra) and
S. trullifolia. Unfortunately, we were unable to sample S.
trullifolia for the present study. Our phylogeny shows some
supported structure within this clade, and furthermore,
Sibbaldiopsis tridentata is nested inside it as sister to
procumbens plus semiglabra. It seems at least that lumping
all of these four species (S. cuneata, S. parviflora, S.
procumbens and S. semiglabra) into a single one may be
overly drastic, especially in the light of the position of
Sibbaldiopsis. In order to solve the question of species
delimitation in this circumboreal clade, it may be necessary
to sample a wider range of populations.
Rydberg (1908) cited ‘‘?Potentilla retusa O. F. Müller’’
as a questionable synonym for Sibbaldiopsis tridentata.
Potentilla retusa was described in Flora Danica and based
on a collection from Greenland, and for some reason, the
flower colour on the plate is yellow. It is clear from the
type material (in herbarium C), however, that Potentilla
retusa is indeed white-flowered and conspecific with Sibbaldiopsis tridentata, and hence, the correct epithet at
specific level should be ‘‘retusa’’ (cf. Taxonomy section).
Sibbaldiopsis tridentata is enclosed within the Sibbaldia
sensu stricto clade in our tree, as well as in the combined
tree of Lundberg et al. (2009) which was based on four
markers. The signal for this result seems to come mainly
from the plastid data because in the nuclear ribosomal tree,
Sibbaldiopsis tridentata is unresolved in a trichotomy at
the base of clade A in Fig. 1 (cf. Fig. 1a in Lundberg et al.
2009). We choose to follow Paule and Soják (2009) and
classify the species in Sibbaldia, in order for Sibbaldia to
be monophyletic. Thus, the name of the species should be
Sibbaldia retusa. However, even though Sibbaldia retusa is
consistently resolved in the Sibbaldia sensu stricto clade,
some uncertainties remain. This species differs in some
characters from the other species in the Sibbaldia sensu
stricto clade, and these characters have a long-standing use
in distinguishing genera in the Potentilleae. The flowers are
white and have fairly long petals rather than small yellow
petals. The number of stamens is 20 instead of five, and the
achenes are hairy rather than glabrous. The number of
stamens and the hairy achenes can safely be considered
plesiomorphies and the white flowers possibly an autapomorphy in this clade, so these characteristics can not support any group. However, as Sibbaldia retusa joins two of
the Sibbaldia sensu stricto species, homoplasy is implied in
the characters. Furthermore, Sibbaldia retusa is a tetraploid
(Dalgaard 1989), and although our results so far do not
show that it is an allopolyploid, it is still a possibility. In
that case, part of its ancestry may be outside Sibbaldia, and
under such a scenario, it might have been preferable to
keep it in Sibbaldiopsis.
Sibbaldia: a molecular phylogenetic study
Wolf (1908) classified Sibbaldia retusa (as Potentilla
tridentata) in a group (‘‘grex’’) along with P. cuneifolia (as
P. ambigua) and P. miyabei (the latter included in Lundberg et al. 2009, but not here). The classification of Wolf
may have prompted the idea that these three species were
close relatives (Robertson 1974), and subsequently, the two
latter species were first recombined into Sibbaldiopsis
(Soják 2004, 2008) and later into Sibbaldia (Paule and
Soják 2009). There is no indication that these three species
form a clade, and to join them in Sibbaldiopsis creates a
non-monophyletic genus. Indeed, although P. cuneifolia
and P. miyabei are similar to each other, neither is similar
to Sibbaldia retusa, and it may be more reasonable from a
morphological standpoint to classify them in different
genera. Potentilla cuneifolia and P. miyabei display a
complex relationship to each other and to the Sibbaldia
sensu stricto clade on the one hand and to the Sibbaldianthe
clade on the other hand (Lundberg et al., 2009). Potentilla
cuneifolia, at least, is a polyploid (Ikeda 1989), and due to
their potentially allopolyploid origin, it is currently not
clear what the exact relationships of these two species are.
Therefore, we think that classifying P. cuneifolia and P.
miyabei in Sibbaldia (Paule and Soják 2009) is undesirable,
unless the name Sibbaldia is applied to a much more
inclusive, still unresolved, clade. Thus, we choose to retain
their Potentilla names here.
Clade B in Fragariinae: the Sibbaldianthe clade
In all of our analyses as well as in preliminary studies
(Kurtto and Eriksson 2003; Lundberg et al. 2009), Sibbaldia adpressa is well supported as sister to Potentilla
bifurca (sometimes classified as Schistophyllidium or Sibbaldianthe), and this clade (B in Fig. 1) is sister to the
Sibbaldia sensu stricto clade, plus Potentilla cuneifolia,
with low support. Potentilla bifurca is similar to S. adpressa, although somewhat larger. The leaves of S. adpressa are similar to those of P. bifurca but smaller (cf.
Soják 2004, Fig. 3:3 and Fig. 3:13–15), both have relatively small flowers, although the flowers of S. adpressa are
smaller. The number of stamens in P. bifurca is 20, which
is the plesiomorphic number for all of Potentilleae, while
S. adpressa has ten. The genus Sibbaldianthe was described for Sibbaldia adpressa (Juzepchuk 1941), and with our
sample, retaining the name Schistophyllidium for bifurca
would not violate a criterion of strict monophyly for genera. However, in the light of the general similarities
between these species, there seems to be little gained in
keeping them apart in separate genera. Hence, contrary to
the view of Soják (2004) but in agreement with Paule and
Soják (2009), we suggest that it is reasonable to classify
both species in this clade in Sibbaldianthe (Kurtto and
Eriksson 2003).
Clade C in Fragariinae: the Dasiphora clade
Sibbaldia perpusilloides is a tiny and prostrate Himalayan
species with white flowers, ten stamens and very small
trifoliate leaves. In collections, it is often found to be
growing more or less intertwined in moss cushions (cf.
Rajput et al. 1997, Fig. 7). Trifoliate leaves in Sibbaldia
species are generally toothed only at the apex, but S. perpusilloides is toothed also along the sides of its tiny leaflets. Soják (2008) considered this species to be isolated
taxonomically as compared to the other species classified
in Sibbaldia, and he remarked that the anthers were intermediate between the Potentilla type and the Fragariinae
type, but we have been unable to distinguish them from the
type seen in other Fragariinae. As mentioned by Soják
(2008), the position of the style is lateral like in the Fragariinae, and the species is here well supported within a
Fragariinae clade (Fig. 1, clade C) along with Dasiphora,
Drymocallis, Potaninia and Chamaerhodos. Because Sibbaldia perpusilloides does not resemble any species in any
of these four genera, there are good reasons to classify it in
its own new genus, Chamaecallis. See ‘‘Taxonomy’’ section below.
Clade D in Potentilla: the Himalayan clade
Four Sibbaldia species from our sample fall within
Potentilla, and this is in full agreement with the assessment
by Soják (2008) based on anther structure and position of
the style on the achenes. These species (S. pentaphylla, S.
purpurea, S. sikkimensis, S. tenuis and S. tetrandra), which
are all found at more or less high elevation in the Himalayas, share the possession of a relatively wide disc inside
the stamens (adaxially), and all have pink or purple petals
except S. tetrandra, which has pale yellow petals. Sibbaldia tenuis and S. macropetala also belong here, although
they were not included in this study, by virtue of the presence of the flower disc and their purple flower colour
(Muravjova 1936, Fig. 6; Handel-Mazzetti 1939). Two
species in this clade have pinnate leaves (S. sikkimensis and
S. tenuis), and the leaflets of the latter are intermediate
between those of S. sikkimensis and the rest of the species
in the clade, which all have palmate leaves with three to
five apically toothed leaflets. Species with pink or purple
flowers are uncommon in Potentilleae and occur in this
clade, in the Potentilla alba clade (subgen. Fragariastrum)
and in a few other cases (such as Potentilla nepalensis and
P. atrosanguinea). In relation to this, it is noteworthy that
clade D is resolved as sister to the Potentilla alba clade
(plus a few yellow-flowered species) in our combined tree,
albeit with very low support. A very similar resolution is
reported by Dobeš and Paule (2010).
123
T. Eriksson et al.
Two species that have been named Sibbaldia probably
belong to the Potentilla alba clade, namely Sibbaldia argentea
(Potentilla ghalgana) and Sibbaldia omeiensis (Potentilla
omeiensis) as they are white-flowered and similar to other
species of that clade. Soják (2007) writes that the type specimen of Sibbaldia omeiensis has dark purple flowers. However,
an image of the specimen is available in digital form from
herbarium PE. The specimen on the sheet can be clearly seen
to have been the basis for the original illustration (Yü and Li
1981), and its flowers are white rather than purple.
Clade E in Potentilla: the Anserina clade
A number of species that have been described in Sibbaldia
have interruptedly pinnate leaves that are very similar to
those of the Anserina clade (sect. Anserina sensu Soják
2007), namely Sibbaldia axilliflora, S. byssitecta, S. emodi,
S. micropetala, S. phanerophlebia and S. potentilloides.
Type material, descriptions and published photographs
indicate that these species are very closely related, and
revisional work may be needed to solve the problem of
what names should be treated as synonyms or recombined
in Potentilla. The accession we have included of Sibbaldia
micropetala is consistently resolved well supported inside
the Anserina clade as was indicated by its leaves, and there
is no doubt that it belongs there. Hence, following these
phylogenetic results, Soják’s (2008) genus Piletophyllum,
in which he classified Sibbaldia emodi and Potentilla micropetala (as Piletophyllum emodi and Piletophyllum
micropetalum, respectively) becomes either a synonym of
Potentilla or a synonym of Argentina, depending on where
genus rank is applied in the tree.
Another notable result in relation to the Anserina clade
(E in Fig. 1) is that Potentilla lignosa is strongly supported
as sister group to the rest of the sampled species from that
clade (see also Dobeš and Paule 2010). Potentilla lignosa is
a white-flowered prostrate shrub with pinnate leaves found
in mountain areas of western Asia, with a close relative
(P. sericophylla) in north-western India. Wolf (1908)
classified P. lignosa in his Potentilla ‘‘grex’’ Xylorrhizae.
Recently, Soják (2004, 2008) resurrected Tylosperma for
these two species. Treating these species as a separate
genus is not a problem if the Anserina clade is classified as
the genus Argentina separate from Potentilla because they
would just become sister genera. However, if the Anserina
clade is retained in Potentilla, accepting Tylosperma would
cause Potentilla to become paraphyletic.
Conclusions
Sibbaldia in the wide sense is shown to be a non-monophyletic assemblage of at least five lineages. Some
123
additional species sometimes referred to Sibbaldia, but
clearly not closely related, are also included in the list of
taxa below. The five Sibbaldia clades discussed here are
related to different parts of Potentilleae, three in Fragariinae and two in Potentilla (Potentillinae sensu Soják 2008).
The taxonomic conclusions that we present here are based
on molecular phylogenetic results that are well supported
and not affected by conflicts between the ITS and trnLF
regions.
Sibbaldia in the strict sense is a small group centred on
Sibbaldia procumbens and consists of three to six species
(S. cuneata, S. parviflora, S. procumbens, S. semiglabra, S.
retusa and possibly S. trullifolia), depending on species
delimitation. The well-supported resolution that we see
within the clade seems to favour the larger number of
species. For the other two lineages of former Sibbaldia
species found in Fragariinae, two additional genera are
necessary: Sibbaldianthe for Sibbaldia adpressa and relatives and a new genus for Sibbaldia perpusilloides. All
other species (of these five groups) should be classified in
Potentilla.
We suggest using the following genera for the species
that used to be classified as Sibbaldia: Sibbaldia, Sibbaldianthe, the new genus Chamaecallis and Potentilla. In
addition, we suggest that S. tridentata should be in Sibbaldia, but the species epithet should be retusa. See the
‘‘Taxonomy’’ section and ‘‘List of taxa’’ below for details.
The molecular phylogeny is consistent with Soják’s
(2008) anther character but not with his classification of
Potentilleae, in which Fragariinae is rendered non-monophyletic. The position of the style does not seem to be a
good character to use as a basis for classification, other
than to define Potentilla s.str., since chloroplast data and
combined nuclear and cpDNA data indicate that lateral-tobasal styles may be plesiomorphic in Potentilleae. However, the ITS tree which shows the Anserina clade as sister
to Fragariinae is fully congruent with that character.
Taxonomy
Chamaecallis Smedmark, gen. nov.
Type species: Chamaecallis perpusillodes (W.W.Sm.)
Smedmark, comb. nov. : Potentilla perpusilloides
W.W.Sm., Records of the Botanical Survey of India
4(5):188–189. 1911. Type specimen: Sikkim, Zemmu
Valley, 4,270 m, July 13, 1909, Smith, Cave 1383a
(CAL). : Sibbaldia perpusilloides (W.W.Sm.) Hand.Mazz. Symbolae Sinicae, Part 7:520. 1933.
= Potentilla brachystemon Hand.-Mazz.
Description: herbs perennial, glabrous or slightly
tomentose, prostrate, tufted. Stems 1–1.5 cm. Leaves trifoliolate, margin of leaflets 2–5 serrate. Flowers solitary,
Sibbaldia: a molecular phylogenetic study
terminal, 5-merous. Petals white-to-cream-coloured. Stamens 10, antisepalous, 2 between each petal, filaments
short, anthers elliptical, thecae confluent at apex. Disc
present. Carpels glabrous, style flattened, lateral.
Diagnosis: Chamaecallis can be distinguished from
Potentilla and Sibbaldia, where it has been classified previously, as well as from Drymocallis, Chamaerhodos,
Dasiphora and Potaninia, to which it is closely related, by
its almost glabrous nature and by the combination of its
prostrate, cushion-like habit, 5-merous flowers and trifoliolate leaves with serrate leaflet margins.
Known distribution: Afghanistan, Myanmar, Bhutan,
Nepal, China and Sikkim.
Etymology: Chamaecallis is formed by combining the
Greek chamae, meaning ground, low or creeping, and calli,
meaning beautiful. The name is also a combination the first
and last parts of the names of two of the most closely
related genera, Chamaerhodos and Drymocallis.
Sibbaldia retusa (O. F. Müller) T. Erikss. comb.
nov. : Potentilla retusa O. F. Müller, Flora Danica 5(14),
tab. 799, 1780. Type: Greenland, Godthaab [‘‘E Grönlandia
misit reverendiss. Balvig. Missionarius’’.], specimen
without collector and number (C!).
Note. The sheet bears five specimens marked 1, 1, 2, 3
and 4, respectively, and different localities for each of the
numbers. Only one, i.e. nr. 2 collected at ‘‘Godthaab’’, has
hairy leaves that conforms to Müller’s description and is
interpreted as holotype. Böcher et al. (1966) note that
Potentilla tridentata f. hirsutifolia Paese is known to occur
rarely in Greenland.
= Potentilla tridentata Solander in Aiton, W. Hortus
Kewensis 2: 216, tab. 9, 1789. : Sibbadiopsis tridentata
(Solander in Aiton) Rydb. Rydberg, P. A. Mem. Columb.
Univ. II: 187, 1898. : Sibbaldia tridentata (Solander in
Aiton) Paule and Soják. Journal of the National Museum
(Prague), Natural History Series, 178:15–16, 2009.
Sibbaldia cuneata Hornem.
Sibbaldia maxima Kesselr. ex Murav. (not seen)
Sibbaldia olgae Juz. and Ovcz. (fide Soják 2004)
Sibbaldia taiwanensis H.L.Li (fide Li et al. 2003)
Potentilla cuneata Lehm. (K!)
Lehmann cites Wallich’s catalogue number 1015
and the locality ‘‘Gossain Than’’. There are two
sheets in the Wallich herbarium with that number,
and they bear at least three different species:
Sibbaldia cuneata, Potentilla cuneifolia and some
unidentified specimen. The Potentilla specimens
are marked 1015.1 ‘‘ex alpibus Kumaon’’, and the
Sibbaldia specimens are marked 1015.2 ‘‘Gossain
Than’’. Since Lehmann cites the latter locality, and
the plant described clearly is a Sibbaldia rather than
Potentilla cuneifolia, we agree with Soják (2008
and elsewhere) that Potentilla cuneata is synonymous with Sibbaldia cuneata.
Sibbaldia parviflora Willd.
Sibbaldia unguiculata Rajput and Tahir.
Described by Rajput and Tahir (2008) (not Rajput
et al. 1997), based on a single collection from
northern India (BM!). We were allowed to sample a
leaflet from the type specimen, and the ITS
sequence is identical to that of Sibbaldia parviflora.
Sibbaldia procumbens L.
Sibbaldia aphanopetala Hand.-Mazz. (fide Li et al.
2003)
Sibbaldia macrophylla Turcz. ex Murav. (fide
Soják 2004)
Sibbaldia octopetala Mill. (not seen)
Sibbaldia perpusilla (Hook. f.) Chatterjee (K!)
Potentilla sibbaldii Hall. f.
Sibbaldia retusa (O.F. Müll.) T. Erikss.
List of taxa
Below are listed species that have at some point been
referred to Sibbaldia and their tentative classification. Note
that the synonymy only covers Sibbaldia species names
and that it is not a full taxonomic revision. It is based on
molecular phylogenetic results from this and other studies,
in addition to the study of herbarium specimens, previously
published pictures, descriptions and views of other authors.
It is included here in the hope that it may be useful for
further studies.
Sibbaldia L.
Coelas Dulac
(Jussiea L. ex Sm. Name not validly published.)
Potentilla retusa O.F. Müll. (C!)
Potentilla tridentata Aiton
Sibbadiopsis tridentata (Aiton) Rydb.
Sibbaldia tridentata (Aiton) Paule and Soják
Sibbaldia semiglabra C.A.Mey.
Sibbaldia trullifolia (Hook.f.) Chatterjee (fide Soják
2008; K!)
Sibbaldianthe Juz.
Sibbaldianthe adpressa (Bunge) Juz.
Sibbaldia adpressa Bunge
Sibbaldia fragariastrum Tucz. ex Ledeb.
Sibbaldia minutissima Kitam. (fide Ikeda et al. 2004)
Potentilla lindenbergii Lehm. (fide Soják 1970)
123
T. Eriksson et al.
Sibbaldianthe sericea Grubov
Sibbaldia sericea (Grubov) Soják
Sibbaldianthe bifurca (L.) Kurtto and T. Erikss.
Potentilla bifurca L.
Schistophyllidium bifurcum (L.) Ikonn.
Former Potentilla
Potentilla cuneifolia Bertol.
Potentilla ambigua Cambess. (K!)
This name is not valid since Potentilla ambigua
Gaud. is an older name.
Sibbaldiopsis cuneifolia (Bertol.) Soják
Sibbaldia cuneifolia (Bertol.) Paule and Soják
See Sibbaldia cuneata for a discussion on Potentilla
cuneata Lehm., a name we have previously used for
this taxon.
Potentilla miyabei Makino
Sibbaldiopsis miyabei (Makino) Soják
Sibbaldia miyabei (Makino) Paule and Soják
Anserina clade; Potentilla sect. Anserina [in part]
Potentilla micropetala D. Don
Potentilla axilliflora Hook. f. (K!)
Sibbaldia axilliflora (Hook. f.) Chatterjee
Sibbaldia byssitecta Soják (K!)
Sibbaldia potentilloides Cambess.
Sibbaldia emodi H. Ikeda and H. Ohba (close or
conspecific with P. micropetala). Yet to be recombined in Potentilla.
Sibbaldia phanerophlebia T.T.Yü and C.L.Li (close
to P. micropetala). Yet to be recombined in Potentilla.
Potentilla glabriuscula (T.T.Yü and C.L.Li) Soják
Sibbaldia glabriuscula T.T.Yü and C.L.Li (Fide
Soják 1988; Ikeda and Ohba 1999)
Potentilla microphylla D.Don
Sibbaldia pusilla (W.W.Sm.) Dikshit and Panigrahi
Potentilla sensu stricto clade [in part]
Potentilla sericea L.
Sibbaldia compacta (W.W.Sm. and Cave) Dixit and
Panigrahi (K!)
Horkelia californica Cham. and Schltdl.
Sibbaldia californica Spreng. (fide Keck 1938).
Horkelia congesta (fide Keck 1938).
Sibbaldia congesta D.Dietr.
123
Potentilla pulvinata (T.T.Yü and C.L.Li) Soják
Sibbaldia pulvinata T.T.Yü and C.L.Li (fide Soják
1994)
Potentilla alba clade; subg. Fragariastrum
Potentilla ghalghana Juz.
Sibbaldia argentea Owerin ex Juz. (fide Juzepczuk
1941)
Potentilla omeiensis (T.T.Yü and C.L.Li) Soják
Sibbaldia omeiensis T.T.Yü and C.L.Li
Potentilla sikkimensis Prain
Sibbaldia sikkimensis (Prain) Chatterjee
Sibbaldia melinotricha Hand.-Mazz.
Potentilla tenuis (Hand.-Mazz.) Soják
Sibbaldia tenuis Hand.-Mazz.
Potentilla purpurea (Royle) Hook. f.
Sibbaldia purpurea Royle
Potentilla suavis Soják
Sibbaldia macropetala Murav.
Potentilla clandestina Soják
Sibbaldia pentaphylla J.Krause
Potentilla tetrandra (Hook. f.) Bunge
Sibbaldia tetrandra Bunge
Dryadanthe tetrandra (Bunge) Juz.
Chamaerhodos Bunge [in part]
Chamaerhodos erecta (L.) Bunge
Sibbaldia erecta L.
Sibbaldia polygyna Willd. ex Schult.
Chamaerhodos altaica (Laxm.) Bunge
Sibbaldia altaica Laxm.
Chamaerhodos grandiflora Pall. ex Schult.
Sibbaldia grandiflora Pall.
Chamaerhodos sabulosa Bunge
Sibbaldia sabulosa (Bunge) Steud.
Chamaecallis Smedmark
Chamaecallis perpusillodes (W.W.Sm.) Smedmark
Potentilla perpusilloides W.W.Sm.
Sibbaldia perpusilloides (W.W.Sm.) Hand.-Mazz.
Potentilla brachystemon Hand.-Mazz.
Sibbaldia: a molecular phylogenetic study
Acknowledgments We are grateful for the access to herbarium
material from the herbaria in Stockholm (S), Copenhagen (C) and
London (BM, K). We are also grateful for being able to cultivate
certain species in the Bergius Botanic Garden, Stockholm. We thank
A. Yoder (Duke University) and E. Conti (Universität Zürich) for help
with sequencing during lean times and B. Ertter (University of California, Berkeley) for information on Horkelia.
References
Baum DA, Sytsma KJ, Hoch PC (1994) A phylogenetic analysis of
Epilobium (Onagraceae) based on nuclear ribosomal DNA
sequences. Syst Bot 19:363–388
Bentham G (1858) Handbook of the British flora. L Reeve Co,
London
Böcher TW, Holmen K, Jakobsen K (1966) Grønlands flora, 2nd edn.
Haase sons, København
Bunge AA (1829) Pentgynia. In: Ledebour CF (ed) Flora altaica, vol
1. G Reimer, Berlin, pp 428–433
Chatterjee D (1938) A note on the Indian and Chinese species of the
genus Sibbaldia. Linn Notes RBG Edinb 19:325–327
Dalgaard V (1989) Additional chromosome numbers in vascular
plants from the Disko Bugt area (west Greenland). Willd
19:199–213
Dikshit BK, Panigrahi G (1998) The family Rosaceae in India
(revisionary studies on Potentilla L., Sibbaldia L., Brachycaulos
Dikshit, Panigr.). Bishen Singh Mahendra Pal Singh, Dehra Dun
Dixit BK, Panigrahi G (1981) Revision of the genus Sibbaldia L.
(Rosaceae). India Proc Indian Acad Sci (Plant Sci) 90:253–272
Dobeš C, Paule J (2010) A comprehensive chloroplast DNA-based
phylogeny of the genus Potentilla (Rosaceae): implications for
its geographic origin, phylogeography and generic circumscription. Mol Phylogenet Evol 56:156–175
Doyle JJ, Doyle JL (1990) Isolation of plant DNA from fresh tissue.
Focus 12:13–15
Endlicher S (1840) Genera plantarum, vol 2. Fr Beck, Wien
Eriksson T, Donoghue MJ, Hibbs MS (1998) Phylogenetic analysis of
Potentilla using DNA sequences of nuclear ribosomal internal
transcribed spacers (ITS), and implications for the classification
of Rosoideae (Rosaceae). Pl Syst Evol 211:155–179
Eriksson T, Hibbs MS, Yoder AD, Delwiche CF, Donoghue MJ
(2003) The phylogeny of Rosoideae (Rosaceae) based on
sequences of the internal transcribed spacers (ITS) of nuclear
ribosomal DNA and the trnL/F region of chloroplast DNA. Int J
Pl Sci 164:197–211
Farr ER, Leussink JA, Stafleu FA (1979) Index nominum genericorum (Plantarum), vol 3. Regnum vegetabile 102. Bohn, Scheltema and Halkema, Utrecht
Focke WO (1888) Potentilleae. In: Engler A, Prantl K (eds) Die
naturlichen Pflanzenfamilien III(3). Engelmann, Leipzig, pp 32–36
Gehrke B, Bräuchler C, Romoleroux K, Lundberg M, Heubl G,
Eriksson T (2008) Molecular phylogenetics of Alchemilla,
Aphanes and Lachemilla (Rosaceae) inferred from plastid and
nuclear intron and spacer DNA sequences, with comments on
generic classification. Mol Phylogenet Evol 47:1030–1044
Guindon S, Gascuel O (2003) A simple, fast, and accurate algorithm
to estimate large phylogenies by maximum likelihood. Syst Biol
52:696–704
Handel-Mazzetti H (1939) Plantae Sinensis. Rosaceae. 1: Potentillineae. Acta Horti Gothob 13:289–334
Helfgott DM, Francisco-Ortega J, Santos-Guerra A, Jansen RK,
Simpson BB (2000) Biogeography and breeding system evolution of the woody Bencomia alliance (Rosaceae) in Macaronesia
based on ITS sequence data. Syst Bot 25:82–97
Hill J (1756) The British herbal: an history of plants and trees, natives
of Britain cultivated for use or raised for beauty. T. Osborne,
London
Holmgren PK, Holmgren NH, Barnett LC (eds) (1990) Index
herbariorum, part I: the herbaria of the world, 8th edn. IAPT
and New York Botanical garden, New York
Hooker JD (1865) Rosaceae. In: Bentham G, Hooker JD (eds) Genera
plantarum, vol 1. Reeve and co., London, pp 600–629
Hooker JD (1878) Rosaceae (Potentilla). The flora of British India,
vol II. L. Reeve Co., London, pp 345–360
Huelsenbeck JP, Ronquist FR (2001) MRBAYES: Bayesian inference
of phylogeny. Bioinformatics 17:754–755
Hurvich CM, Tsai C-L (1989) Regression and time series model
selection in small samples. Biometrika 76:297–307
Hutchinson J (1964) The genera of flowering plants, vol 1,
dicotyledons. Clarendon Press, Oxford
Ikeda H (1989) Chromosome numbers of Himalayan Potentilla
(Rosaceae). J Jap Bot 64:361–367
Ikeda H, Ohba H (1999) A systematic revision of Potentilla L. section
Leptostylae (Rosaceae) in the Himalaya and adjacent regions.
Bull Univ Mus Univ Tokyo 39:31–117
Ikeda H, Ohba H, Subedi MN (2004) Sibbaldia minutissima Kitam.
(Rosaceae) is conspecific to S. adpressa. Studies of the Flora of
Mustang, Central Nepal, 2. J Jap Bot 79:91–95
Juzepchuk SV (1941) Rosoideae. In: Flora of the USSR, vol X.
Izdatelstvo Akademii Nauk SSSR, Moskva-Leningrad, pp 3–380
Keck DD (1938) Revision of Horkelia and Ivesia. Lloydia 1:75–142
Kurtto A, Eriksson T (2003) Atlas Florae Europaeae notes. 15.
Generic delimitation and nomenclatural adjustments in Potentilleae (Rosaceae). Ann Bot Fenn 40:135–141
Li C, Ikeda H, Ohba H (2003) Sibbaldia. Flora of China. 9. Science
Press, Beijing, pp 329–333
Linnaeus C (1753) Species plantarum 1. Salvius, Stockholm
Linnaeus C (1754) Genera plantarum. Salvius, Stockholm
Löytynoja A, Goldman N (2005) An algorithm for progressive
multiple alignment of sequences with insertions. Proc Natl Acad
Sci USA 102:10557–10562
Löytynoja A, Goldman N (2008) Phylogeny-aware gap placement
prevents errors in sequence alignment and evolutionary analysis.
Science 320:1632–1635
Lundberg M, Töpel M, Eriksen B, Nylander JAA, Eriksson T (2009)
Allopolyploidy in Fragariinae (Rosaceae): comparing four DNA
sequence regions, with comments on classification. Mol Phylogenet Evol 51:269–280
Muravjova OA (1936) The genus Sibbaldia L. and its species. Acta
Inst Bot Acad Scient URSS Sér 1 Fasc 2:217–241
Nestler CG (1816) Monographia de Potentilla. Treuttel, Würtz, Paris
Nylander JAA (2004) MrAIC.pl. https://github.com/nylander/MrAIC
Nylander JAA, Wilgenbusch JC, Warren DL, Swofford DL (2008)
AWTY (are we there yet?): a system for graphical exploration of
MCMC convergence in Bayesian phylogenetics. Bioinformatics
24:581–583
Paule J, Soják J (2009) Taxonomic comments on the genus
Sibbaldiopsis Rydb. (Rosaceae). J Natl Mus (Prague), Nat Hist
Ser 178:15–16
Potter D, Eriksson T, Evans RC, Oh S, Smedmark JEE, Morgan DR,
Kerr M, Robertso KR, Arsenault M, Dickinson TA, Campbell
CS (2007) Phylogeny and classification of Rosaceae. Pl Syst
Evol 266:5–43
Rajput MTM, Tahir SS (2008) A new species of the genus Sibbaldia
(Rosaceae) from south east Asia. Pak J Bot 40:2255–2258
Rajput MTM, Tahi SS, Hussain SZ, Spongberg SA (1997) The genus
Sibbaldia (Rosaceae). Pak J Bot 29:1–38
Rambaut A (2002) Se-Al. Computer software distributed by the
author. Institute of Evolutionary Biology, University of Edinburgh. Version 2.0. http://tree.bio.ed.ac.uk/software/seal/
123
T. Eriksson et al.
Robertson K (1974) The genera of Rosaceae in the Southeastern
United States. J Arnold Arbor 55:303–401
Ronquist F, Huelsenbeck JP (2003) MRBAYES 3: bayesian phylogenetic inference under mixed models. Bioinformatics
19:1572–1574
Rydberg PA (1898) A monograph of the North American Potentilleae. In: Memoirs from the Department of Botany of Columbia
University, Columbia University, New York, pp 1–223
Rydberg PA (1908) Rosaceae. In: North American flora, vol 22. The
New York Botanical Garden, New York
Seringe NC (1825) Potentilla. In: De Candolle AP (ed) Prodromus
systematis naturalis regni vegetabilis. Treuttel, Würtz, Paris,
pp 571–586
Smith JE (1811) Lachesis Lapponica or a tour in Lapland by
Linnaeus, vol I. Taylor Co, London
Soják J (1970) Taxonomische und phytogeographische Anmerkungen
zur Gattung Potentilla. Preslia 42:70–81
Soják J (1988) Notes on Potentilla (Rosaceae) VII. Some Himalayan
taxa. Candollea 43:437–453
Soják J (1989) Generická problematika Potentilla s.l. Cas Nár Muz
Rada Prir 154:117–118
Soják J (2004) Potentilla L. (Rosaceae) and related genera in the
former USSR (identification key, checklist and figures). Notes on
Potentilla XVI. Bot Jahrb Syst 125:253–340
Soják J (2007) Potentilla (Rosaceae) in China. Notes on Potentilla
XIX. Harv Pap Bot 12:285–324
Soják J (2008) Notes on Potentilla XXI. A new division of the tribe
Potentilleae (Rosaceae) and notes on generic delimitations. Bot
Jahrb Syst 127:349–358
Soják J (2010) Argentina Hill, a genus distinct from Potentilla
(Rosaceae). Thaiszia: J Bot 20:91–97
Spenner FCL (1829) Flora friburgensis. Brisgoviae, Friburg, p 1084
123
Staden R (1996) The Staden sequence analysis package. Mol
Biotechnol 5:233–241
Sugiura N (1978) Further analysis of data by Akaike’s information
criterion and finite corrections. Comm St A 7:13–26
Taberlet P, Gielly L, Pautou G, Bouvet J (1991) Universal primers for
amplification of three non-coding regions of chloroplast DNA. Pl
Mol Biol 17:1105–1109
Tavaré S (1986) Some probabilistic and statistical problems in the
analysis of DNA sequences. Lect Math Life Sci 17:57–86
Töpel M, Lundberg M, Eriksson T, Eriksen B (2011) Molecular data
and ploidal levels indicate several putative allopolyploidization
events in the genus Potentilla (Rosaceae). PloS Curr. doi:10.
1371/currents.RRN1237
Urbatsch LE, Baldwin B, Donoghue MJ (2000) Phylogeny of
coneflowers and relatives (Heliantheae: Asteraceae) based on
nuclear rDNA internal transcribed spacer (ITS) sequences and
chloroplast DNA restriction site data. Syst Bot 25:539–565
White TJ, Bruns T, Lee S, Taylor J (1990) Amplification and direct
sequencing of fungal ribosomal RNA genes for phylogenetics.
In: Innis MA, Gelfand DH, Sninsky JJ, White TJ (eds) PCR
protocols: a guide to methods and applications. Academic Press,
London, pp 315–322
Wolf T (1908) Monographie der Gattung Potentilla. Biblioth Bot
16(Heft 71):1–714
Yang Z (1993) Maximum-likelihood estimation of phylogeny from
DNA sequences when substitution rates differ over sites. Molec
Biol Evol 10:1396–1401
Yang Z, Rannala B (1997) Bayesian phylogenetic inference using
DNA sequences: a Markov chain monte carlo method. Molec
Biol Evol 14:717–724
Yü T-T, Li C-L (1981) New species of Sibbaldia from China. Acta
Phytotax Sin 19:515–518