Skip to main content

Advertisement

Log in

Conservation management of rare and predominantly selfing tropical trees: an example using Hopea bilitonensis (Dipterocarpaceae)

  • Original Paper
  • Published:
Biodiversity and Conservation Aims and scope Submit manuscript

Abstract

Hopea bilitonensis is an extremely rare and predominantly selfing dipterocarp in Peninsular Malaysia. A comprehensive research was initiated to assess the ecological genetics of H. bilitonensis to elucidate specific ecological and genetic requirements and subsequently to recommend conservation strategies. The objective for conservation of a rare plant such as H. bilitonensis differs from that of a common plant. For common plants, the conservation strategies are to prevent the species from becoming endangered. In contrast, for rare plants, the final race against extinction is being fought. Tropical forests are rich in plant species diversity and obtaining adequate knowledge to set conservation strategies for the majority of these species might be difficult. Thus, it is suggested that for the conservation of tree species, the species can be grouped according to their life history traits. The information generated for a species can then be adapted to species that have similar types of life history traits. We have recently generated the ecological genetics information for a rare and predominantly outcrossed dipterocarp (Shorea lumutensis). This study on H. bilitonensis will provide ecological genetics information for the conservation of rare and predominantly selfing dipterocarps.

This is a preview of subscription content, log in via an institution to check access.

Access this article

Price excludes VAT (USA)
Tax calculation will be finalised during checkout.

Instant access to the full article PDF.

Fig. 1
Fig. 2
Fig. 3
Fig. 4
Fig. 5
Fig. 6
Fig. 7

Similar content being viewed by others

References

  • Appanah S, Mohd Rasol AM (1994) Fruiting and seedling survival of diptercarps in a logged forest. J Trop For Sci 6:215–222

    Google Scholar 

  • Ashton PS (1982) Dipterocarpaceae. Flora Malesiana Ser 1(9):237–552

    Google Scholar 

  • Ashton PMS, Gunatilleke CVS, Gunatilleke IAUN (1995) Seedling survival and growth of four Shorea species in a Sri Lankan rainforest. J Trop Ecol 11:263–279

    Article  Google Scholar 

  • Barrett SCH, Kohn JR (1991) Genetic and evolutionary consequences of a small population size in plants: implications for conservation. In: Falk DA, Holsinger KE (eds) Genetics and conservation of rare plants. Oxford University Press, New York, pp 3–30

    Google Scholar 

  • Bebber DP, Brown ND, Speight MR (2004) Dipterocarp seedling population dynamics in Bornean primary lowland forest during the 1997–8 El-Nino Southern Oscillation. J Trop Ecol 20:11–19

    Article  Google Scholar 

  • Blundell AG, Peart DR (2001) Growth strategies of a shade-tolerant tropical tree: the interactive effects of canopy gaps and simulated herbivory. J Ecol 89:608–615

    Article  Google Scholar 

  • Blundell AG, Peart DR (2004) Seedling recruitment failure following dipterocarp mast fruiting. J Trop Ecol 20:229–231

    Article  Google Scholar 

  • Brown ND (1993) The implications of climate and gap microclimate for seedling growth conditions in a Bornean lowland rain forest. J Trop Ecol 9:153–168

    Article  CAS  Google Scholar 

  • Brussard PF (1991) The role of ecology in biological conservation. Ecol Appl 1:6–12

    Article  Google Scholar 

  • Cao CP, Gailing O, Siregar IZ, Siregar UJ, Finkeldey R (2009) Genetic variation in nine Shorea species (Dipterocarpaceae) in Indonesia revealed by AFLPs. Tree Genet Genomes 5:407–420

    Article  Google Scholar 

  • Chakraborty R, Jin L (1993) Determination of relatedness between individuals using DNA fingerprinting. Hum Biol 65:875–895

    PubMed  CAS  Google Scholar 

  • Chan HT (1977) Reproductive biology of some Malaysian dipterocarps. University of Aberdeen, Dissertation

    Google Scholar 

  • Chan HT (1980) Reproductive biology of some Malaysian Dipterocarps. II. Fruiting biology and seedling studies. Malays For 43:438–451

    Google Scholar 

  • Charlesworth D, Charlesworth B (1987) Inbreeding depression and its evolutionary consequences. Annu Rev Ecol Syst 18:237–268

    Article  Google Scholar 

  • Chua LSL, Suhaida M, Hamidah M, Saw LG (2010) Malaysia plant red list: Peninsular Malaysia Dipterocarpaceae. Research Pamphlet No. 129. Forest Research Institute Malaysia, Kuala Lumpur, p 57

    Google Scholar 

  • Condit R, Sukumar R, Hubbell SP, Foster RB (1998) Predicting population trends from size distributions: a direct test in tropical tree communities. Am Natur 152:495–509

    Article  PubMed  CAS  Google Scholar 

  • Condit R, Ashton PS, Baker P, Bunyavejchewin S, Gunatilleke S, Gunatilleke N, Hubbell SP, Losos E, Manokaran N, Sukumar R, Yamakura T (2000) Spatial patterns in the distribution of tropical tree species. Science 288:1414–1418

    Article  PubMed  CAS  Google Scholar 

  • Crowther J (1978) The Gunong Gajah-Tempurong massif, Perak, and its associated cave system, Gua Tempurung. Mal Nat J 32:1–18

    Google Scholar 

  • Degen B, Petit R, Kremer A (2001) SGS-Spatial Genetic Software: a computer program for analysis of spatial genetic and phenotypic structures of individuals and populations. J Hered 92:447–449

    Article  PubMed  CAS  Google Scholar 

  • Ennos RA (1994) Estimating the relative rates of pollen and seed migration among plant populations. Heredity 72:250–259

    Article  Google Scholar 

  • Gitzendanner M, Soltis PS (2000) Patterns of genetic variation in rare and widespread plant congeners. Am J Bot 87:783–792

    Article  PubMed  CAS  Google Scholar 

  • Goudet J (2002) FSTAT version 2.9.3.2: a computer package for PCs which estimates and tests gene diversities and differentiation statistics from codominant genetic markers. http://www.unil.ch/izea/software/fstat.html

  • Haase P (1995) Spatial pattern analysis in ecology based on Ripley’s K-function: introduction and methods of edge correction. J Veg Sci 6:575–582

    Article  Google Scholar 

  • Hamrick JL (1993) Genetic diversity and conservation in tropical forest. In: Drysdale RM, John SET, Yapa AC (eds) Proceedings of the ASEAN–Canada Symposium on Genetic Conservation and Production of Tropical Tree Seed, ASEAN–Canada Forest Tree Seed Center, Saraburi, pp 1–9

  • Hamrick JL, Godt MJW (1989) Allozyme diversity in plant species. In: Brown AHD, Clegg MJ, Kahler AL, Weir BS (eds) Plant population genetics, breeding and genetic resources. Sinauer Associate, Sunderland, pp 43–63

    Google Scholar 

  • Harata T, Nanami S, Yamakura T, Matsuyama S, Chong L, Diway BM, Tan S, Itoh A (2012) Fine-scale spatial genetic structure of ten dipterocarp tree species in a Bornean rain forest. Biotropica 44:586–594

    Article  Google Scholar 

  • Holsinger KE (1996) The scope and limits of conservation genetics. Evolution 50:2558–2561

    Article  Google Scholar 

  • Huenneke LF (1991) Ecological implications of genetic variation in plant populations. In: Falk DA, Holsinger KE (eds) Genetics and conservation of rare plants. Oxford University Press, New York, pp 31–44

    Google Scholar 

  • Itoh A (1995) Effects of forest floor environment on germination and seedling establishment of two Bornean rainforest emergent species. J Trop Ecol 11:517–527

    Article  Google Scholar 

  • IUCN (1994) IUCN Red List Categories and Criteria version 2.3. IUCN, Gland

  • Jarne P, Lagoda PJ (1996) Microsatellite, from molecules to populations and back. Trends Ecol Evol 11:424–429

    Article  PubMed  CAS  Google Scholar 

  • Kalisz S, Nason JD, Hanzawa FM, Tonsor SJ (2001) Spatial population genetic structure in Trillium grandiflorum: the roles of dispersal, mating history and selection. Evolution 55:1560–1568

    PubMed  CAS  Google Scholar 

  • Kettle CJ, Hollingsworth PM, Burslem DFRP, Maycock CR, Khoo E, Ghazoul J (2011) Determinants of fine-scale spatial genetic structure in three co-occurring rain forest canopy trees in Borneo. Perspect Plant Ecol Evol Syst 13:45–54

    Google Scholar 

  • Kochummen KM (1997) Tree Flora of Pasoh Forest. Malayan Forest Records No. 44, Forest Research Institute Malaysia, Kepong, Kuala Lumpur

  • Konuma A, Tsumura Y, Lee CT, Lee SL, Okuda T (2000) Estimation of gene flow in the tropical rain forest tree Neobalanocarpus heimii (Dipterocarpaceae), inferred from paternity analysis. Mol Ecol 9:1843–1852

    Article  PubMed  CAS  Google Scholar 

  • Lande RC, Barrowclough GF (1987) Effective population size, genetic variation, and their use in population management. In: Soulé ME (ed) Viable populations for conservation. Cambridge University Press, Cambridge, pp 87–124

    Chapter  Google Scholar 

  • Lee SL, Wickneswari R, Mahani MC, Zakri AH (2000) Genetic diversity of Shorea leprosula Miq. (Dipterocarpaceae) in Malaysia: implications for conservation of genetic resources and tree improvement. Biotropica 32:213–224

    Google Scholar 

  • Lee SL, Ng KKS, Saw LG, Norwati A, Siti Salwana MH, Lee CT, Norwati M (2002) Population genetics of Intsia palembanica (Leguminosae) and genetic conservation of Virgin Jungle Reserves (VJRs) in Peninsular Malaysia. Am J Bot 89:447–459

    Article  PubMed  Google Scholar 

  • Lee SL, Tani N, Ng KKS, Tsumura Y (2004) Characterization of 15 polymorphic microsatellite loci in an endangered tropical tree Hopea bilitonensis (Dipterocarpaceae) in Peninsular Malaysia. Mol Ecol Notes 4:147–149

    Article  CAS  Google Scholar 

  • Lee SL, Ng KKS, Saw LG, Lee CT, Norwati M, Tani N, Tsumura Y, Koskela J (2006) Linking the gaps between conservation research and conservation management of rare dipterocarps: a case study of Shorea lumutensis. Biol Conserv 131:72–92

    Article  Google Scholar 

  • Lewis PO, Crawford DJ (1995) Pleistocene refugium endemics exhibit greater allozyme diversity than widespread congeners in the genus Polygonella (Polygonaceae). Am J Bot 82:141–149

    Article  Google Scholar 

  • Liu K, Muse SV (2005) PowerMarker: integrated analysis environment for genetic marker data. Bioinformatics 21:2128–2129

    Article  PubMed  CAS  Google Scholar 

  • Morley RJ, Flenley JR (1987) Late Cainozoic vegetational and environmental changes in the Malay Archipelago. In: Whitmore TC (ed) Biogeographical evolution of the Malay Archipelago. Clarendon Press, Oxford, pp 50–59

    Google Scholar 

  • Murray M, Thompson WF (1980) Rapid isolation of high molecular weight plant DNA. Nucleic Acid Res 8:4321–4325

    Article  PubMed  CAS  Google Scholar 

  • Neel MC, Ellstrand C (2001) Pattern of allozyme diversity in the threatened plant Erigeron parishii (Asteraceae). Am J Bot 88:810–818

    Article  PubMed  CAS  Google Scholar 

  • Nei M (1987) Molecular evolutionary genetics. Columbia University Press, New York

    Google Scholar 

  • Ng FSP, Mat Asri NS (1991) Germination and seedling records. FRIM Research Pamphlet No. 108, Forest Research Institute Malaysia, Kuala Lumpur, pp 36–55

  • Ng KKS, Lee SL, Koh CL (2004) Spatial structure and genetic diversity of two tropical tree species with contrasting breeding systems and different ploidy levels. Mol Ecol 13:657–669

    Article  PubMed  Google Scholar 

  • Ng KKS, Lee SL, Saw LG, Plotkin JB, Koh CL (2006) Spatial structure and genetic diversity of three tropical tree species with different habitat preferences within a natural forest. Tree Genet Genomes 2:121–131

    Article  Google Scholar 

  • Palmiotto PA, Davies SJ, Vogt KA, Ashton MS, Vogt DJ, Ashton PS (2004) Soil-related habitat specialization in dipterocarp rain forest tree species in Borneo. J Ecol 92:609–623

    Article  Google Scholar 

  • Peters HA (2003) Neighbor-regulated mortality: the influence of positive and negative density dependence on tree populations in species-rich tropical forests. Ecol Lett 6:757–765

    Article  Google Scholar 

  • Petit RJ, El Mousadik A, Pons O (1998) Identifying population for conservation on the basis of genetic markers. Conserv Biol 12:844–855

    Article  Google Scholar 

  • Plotkin JB, Potts M, Leslie N, Manokaran N, LaFrankie J, Ashton PS (2000) Species-area curves, spatial aggregation, and habitat specialization in tropical forests. J Theor Biol 207:81–99

    Article  PubMed  CAS  Google Scholar 

  • Reich PB, Borchert R (1984) Water stress and tree phenology in a tropical dry forest in the lowlands of Costa Rica. J Ecol 72:61–74

    Article  Google Scholar 

  • Rice WR (1989) Analysing tables of statistical tests. Evolution 43:223–225

    Article  Google Scholar 

  • Ripley BD (1976) The second-order analysis of stationary processes. J Appl Probab 13:255–266

    Article  Google Scholar 

  • Ritland K (2002) Extensions of models for the estimation of mating systems using n independent loci. Heredity 88:221–228

    Article  PubMed  Google Scholar 

  • Rossetto M, Kooyman RM (2005) The tension between dispersal and persistence regulates the current distribution of rare paleo-edemic rain forest flora: a case study. J Ecol 93:906–917

    Article  Google Scholar 

  • Saitou N, Nei M (1987) The neighbor-joining method: a new method for reconstructing phylogenetic trees. Mol Biol Evol 11:553–570

    Google Scholar 

  • Silvertown JW (1987) Introduction to plant population ecology, 2nd edn. Longman, London

    Google Scholar 

  • Simberloff D (1988) The contribution of population and community biology to conservation science. Annu Rev Ecol Syst 19:473–511

    Article  Google Scholar 

  • Slatkin M (1995) A measure of population subdivision based on microsatellite allele frequency. Genetics 139:457–462

    PubMed  CAS  Google Scholar 

  • Sokal RR, Oden NL (1978) Spatial autocorrelation in biology. I. Methodology. Biol J Linn Soc 10:199–228

    Article  Google Scholar 

  • Sokal RR, Wartenberg DE (1983) A test of spatial autocorrelation analysis using an isolation-by-distance model. Genetics 105:219–247

    PubMed  CAS  Google Scholar 

  • Takeuchi Y, Ichikawa S, Konuma A, Tomaru N, Niiyama K, Lee SL, Norwati M, Tsumura Y (2004) Comparison of the fine-scale genetic structure of three dipterocarp species. Heredity 92:323–328

    Article  PubMed  CAS  Google Scholar 

  • Tjia HD, Sujitno S, Suklija Y, Harsono RAF, Rachmat A, Hainim J, Djunaedi (1984) Holocene shorelines in the Indonesian Tin Islands. Mod Quat Res Southeast Asia 8:103–117

    Google Scholar 

  • Turner IM (1990) The seedling survivorship and growth of three Shorea species in a Malaysian tropical rain forest. J Trop Ecol 6:469–478

    Article  Google Scholar 

  • Walker D (1956) Studies in the quarternary of the Malay Peninsula. I. Alluvial deposits of Perak and changes in the relative levels of land and sea. Fed Mus J 2:19–34

    Google Scholar 

Download references

Acknowledgments

We thank the Forest Department of Perak for granting us permission to access the forest reserves. The foresters and rangers of the Kinta/Manjung District Forest Office provided assistance during the field work and the officers from the District Land Office provided the information on the land status. We are grateful to the late Chan Yee Chong, Ghazali Jaafar, Yahya Mahani, Ramli Ponyoh, Mariam Din, Sharifah Talib, Damahuri Sabari, Mustapa Data and Ayau Kanir for their excellent assistance in the laboratory and field. We also extend our thanks to Chen King Min, Quarry Manager, Superior Lime Sdn. Bhd. and the GIS Units of Forestry Department Headquarters and FRIM for useful information given. Special thanks go to the Forest Engineering Team (Natural Forest Division, FRIM) for their technical assistance. This study was supported in part by the IRPA research grant (09-04-01-0013-EA001), the Timber Export Levy Fund (Flora Malaysiana Centre Programme, Project 6), and the Bioversity International Agreement No. APO 06/025.

Author information

Authors and Affiliations

Authors

Corresponding author

Correspondence to Soon Leong Lee.

Rights and permissions

Reprints and permissions

About this article

Cite this article

Lee, S.L., Chua, L.S.L., Ng, K.K.S. et al. Conservation management of rare and predominantly selfing tropical trees: an example using Hopea bilitonensis (Dipterocarpaceae). Biodivers Conserv 22, 2989–3006 (2013). https://doi.org/10.1007/s10531-013-0566-5

Download citation

  • Received:

  • Accepted:

  • Published:

  • Issue Date:

  • DOI: https://doi.org/10.1007/s10531-013-0566-5

Keywords

Navigation