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Molecular phylogeny and systematics of the tribe Chorisporeae (Brassicaceae)

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Abstract

Sequence data from nuclear (ITS) and chloroplast (trnL-F) regions for 89 accessions representing 56 out of 64 species from all five genera of the tribe Chorisporeae (plus Dontostemon tibeticus) have been studied to test the monophyly of the tribe and its component genera, clarify its boundaries, and elucidate its phylogenetic position in the family. Both data sets showed strong support for the monophyly of the Chorisporeae as currently delimited, though the position of its tentative member D. tibeticus was not resolved by ITS. Parrya and Pseudoclausia are poly- and paraphyletic with regard to each other, and Chorispora is either polyphyletic or at least paraphyletic (comprising Diptychocarpus) within a weakly supported monophyletic clade. The incongruence in branching pattern among the markers was most likely caused by hybridization and possibly influenced by incomplete lineage sorting. The present results suggest uniting Pseudoclausia, Clausia podlechii, and Achoriphragma with Parrya and transferring P. beketovii and P. saposhnikovii to Leiospora (Euclidieae). We also obtained support for splitting Chorispora into two geographically defined groups, one of which is closer to Diptychocarpus. Both data sets revealed a close relationship of the Chorisporeae to Dontostemoneae, while ITS also indicated affinity to Hesperideae. Therefore, the position of Chorisporeae needs further verification.

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Acknowledgments

Financial support for stay of the first author at the Department of Functional Genomics and Proteomics of Masaryk University was provided by the South Moravian Region (project “Brain”). This work was supported by research grants from the Grant Agency of the Czech Academy of Science (IAA601630902) and the Czech Ministry of Education (MSM0021622415). Fieldwork was supported by the National Geographic Foundation of the USA (grant no. 8773-10). We thank the curators and directors of the herbaria, as well as A.Y. Korolyuk, A.L. Ebel, G.A. Lazkov, S.V. Smirnov, H. Hurka, H. Moazzeni, and K. Mummenhoff, for supplying plant material. Two anonymous reviewers are highly appreciated for valuable comments and notes.

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  1. South-Siberian Botanical Garden, Altai State University, Lenina str. 61, 656049, Barnaul, Russia

    Dmitry A. German

  2. Laboratoire de Botanique Evolutive, Institut De Biologie, Université de Neuchâtel, Rue Émile-Argand 11, 2000, Neuchâtel, Switzerland

    Jason R. Grant

  3. Department of Functional Genomics and Proteomics, Faculty of Science, Masaryk University, Kotlarska 2, 61137, Brno, Czech Republic

    Dmitry A. German & Martin A. Lysak

  4. CEITEC, Masaryk University, Zerotinovo nam. 9, 60177, Brno, Czech Republic

    Martin A. Lysak

  5. Missouri Botanical Garden, P.O. Box 299, St. Louis, MO, 63166-0299, USA

    Ihsan A. Al-Shehbaz

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  1. Dmitry A. German
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Correspondence to Dmitry A. German.

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Supplementary material 1 Results of parsimony analysis of ITS including the strict consensus of 10,000 MPTs and results of bootstrap and jackknife analyses. (PDF 96 kb)

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Supplementary material 2 Results of parsimony analysis of trnL-F including the strict consensus of 10,000 MPTs and results of bootstrap and jackknife analyses. (PDF 84 kb)

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German, D.A., Grant, J.R., Lysak, M.A. et al. Molecular phylogeny and systematics of the tribe Chorisporeae (Brassicaceae). Plant Syst Evol 294, 65–86 (2011). https://doi.org/10.1007/s00606-011-0452-0

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