Skip to main content
Log in

Development of wheat–Aegilops speltoides recombinants and simple PCR-based markers for Sr32 and a new stem rust resistance gene on the 2S#1 chromosome

  • Original Paper
  • Published:
Theoretical and Applied Genetics Aims and scope Submit manuscript

Abstract

Key message

Wheat– Aegilops speltoides recombinants carrying stem rust resistance genes Sr32 and SrAes1t effective against Ug99 and PCR markers for marker-assisted selection.

Abstract

Wild relatives of wheat are important resources for new rust resistance genes but underutilized because the valuable resistances are often linked to negative traits that prevent deployment of these genes in commercial wheats. Here, we report ph1b-induced recombinants with reduced alien chromatin derived from E.R. Sears’ wheat–Aegilops speltoides 2D-2S#1 translocation line C82.2, which carries the widely effective stem rust resistance gene Sr32. Infection type assessments of the recombinants showed that the original translocation in fact carries two stem rust resistance genes, Sr32 on the short arm and a previously undescribed gene SrAes1t on the long arm of chromosome 2S#1. Recombinants with substantially shortened alien chromatin were produced for both genes, which confer resistance to stem rust races in the TTKSK (Ug99) lineage and representative races of all Australian stem rust lineages. Selected recombinants were back crossed into adapted Australian cultivars and PCR markers were developed to facilitate the incorporation of these genes into future wheat varieties. Our recombinants and those from several other labs now show that Sr32, Sr39, and SrAes7t on the short arm and Sr47 and SrAes1t on the long arm of 2S#1 form two linkage groups and at present no rust races are described that can distinguish these resistance specificities.

This is a preview of subscription content, log in via an institution to check access.

Access this article

Price excludes VAT (USA)
Tax calculation will be finalised during checkout.

Instant access to the full article PDF.

Fig. 1
Fig. 2
Fig. 3
Fig. 4
Fig. 5

Similar content being viewed by others

References

  • Bariana HS, McIntosh RA (1993) Cytogenetic studies in wheat. XV. Location of rust resistance genes in VPM1 and their genetic linkage with other resistance genes in chromosome 2A. Genome 36:476–482

    Article  PubMed  CAS  Google Scholar 

  • Dundas IS, Anugrahwati DR, Verlin DC, Park RF, Bariana HS, Mago R, Islam AKMR (2007) New sources of rust resistance from alien species: meliorating linked defects and discovery. Aust J Agric Res 58:545–549

    Article  CAS  Google Scholar 

  • FAO (2013) http://www.fao.org/agriculture/crops/rust/stem/stem-pathotypetracker/stem-effectivesrgenes/en/. Accessed 7 Feb 2013

  • Faris JD, Xu SS, Cai X, Friesen TL, Jin Y (2008) Molecular and cytogenetic characterization of a durum wheat-Aegilops speltoides chromosome translocation conferring resistance to stem rust. Chromosome Res 16:1097–1105

    Article  PubMed  CAS  Google Scholar 

  • Friebe B, Jiang J, Raupp WJ, McIntosh RA, Gill BS (1996) Characterization of wheat-alien translocations conferring resistance to diseases and pests: current status. Euphytica 91:59–87

    Article  Google Scholar 

  • Hare RA, McIntosh RA (1979) Genetic and cytogenetic studies of durable adult-plant resistances in ‘Hope’ and related cultivars to wheat rusts. Z Pflanz 83:350–367

    Google Scholar 

  • Hodson DP, Singh RP, Dixon JM (2005) An initial assessment of the potential impact of stem rust (race UG99) on wheat producing regions of Africa and Asia using GIS. http://apps.cimmyt.org/gis/pdf/UG99postH.pdf. Accessed 7 Feb 2013

  • Jin Y, Singh RP, Ward RW, Wanyera R, Kinyua M, Njau P, Fetch T, Pretorius ZA, Yahyaoui A (2007) Characterization of seedling infection types and adult plant infection responses of monogenic Sr gene lines to race TTKS of Puccinia graminis f. sp. tritici. Plant Dis 91:1096–1099

    Article  Google Scholar 

  • Jin Y, Szabo LJ, Pretorius ZA (2008a) Virulence variation within the Ug99 lineage. http://ses.library.usyd.edu.au/bitstream/2123/3435/1/O02.pdf. Accessed 7 Feb 2013

  • Jin Y, Szabo L, Pretorius ZA, Singh RP, Ward R, Fetch T (2008b) Detection of virulence to resistance gene Sr24 within race TTKS of Puccinia graminis f. sp. tritici. Plant Dis 92:923–926

    Article  Google Scholar 

  • Jin Y, Szabo L, Rouse M, Fetch T, Pretorius ZA, Wanyera R, Njau P (2009) Detection of virulence to resistance gene Sr36 within race TTKS lineage of Puccinia graminis f. sp. tritici. Plant Dis 93:367–370

    Article  CAS  Google Scholar 

  • Kerber ER, Dyck PL (1979) Resistance to stem and leaf rust of wheat in Aegilops squarrosa and transfer of a gene for stem rust resistance to hexaploid wheat. In: Proceedings of the 5th international wheat genetics symposium, pp 358–364

  • Kerber ER, Dyck PL (1990) Transfer to hexaploid wheat of linked genes for adult-plant leaf rust and seedling stem rust resistance from amphiploid of Aegiolops speltoides x Triticum monoccum. Genome 33:530–537

    Article  CAS  Google Scholar 

  • Klindworth DL, Niu Z, Chao S, Friesen TL, Jin Y, Faris JD, Cai X, Xu SS (2012) Introgression and characterization of a goatgrass gene for a high level of resistance to Ug99 stem rust in tetraploid wheat. G3 2:665–673

    Article  PubMed  CAS  Google Scholar 

  • Langridge P, Karakousis A, Collins N, Kretschmer J, Manning S (1995) A consensus linkage map of barley. Mol Breed 1:389–395

    Article  CAS  Google Scholar 

  • Mago R, Spielmeyer W, Lawrence GJ, Lagudah ES, Ellis JG, Pryor A (2002) Identification and mapping of molecular markers linked to rust resistance genes located on chromosome 1RS of rye using wheat–rye translocation lines. Theor Appl Genet 104:1317–1324

    Article  PubMed  CAS  Google Scholar 

  • Mago R, Zhang P, Bariana HS, Verlin DC, Bansal UK, Ellis JG, Dundas IS (2009) Development of wheat lines carrying stem rust resistance gene Sr39 with reduced Aegilops speltoides chromatin and simple PCR markers for marker-assisted selection. Theor Appl Genet 124:65–70

    Google Scholar 

  • McIntosh RA (1988) Catalogue of gene symbols for wheat. In: Miller TE, Koebner RMD (eds) Proceedings of the 7th international wheat genetics symposium, vol 2. Institute of Plant Science Research, Cambridge, pp 1225–1323

    Google Scholar 

  • McIntosh RA (1991) Alien sources of disease resistance in bread wheats. In: Sasakuma T, Kinoshita T (eds) Memorial international symposium on cytoplasmatic engineering in wheat. Nuclear and organellar genomes of wheat species. Hokkaido University, Sapporo, pp 320–332

    Google Scholar 

  • McIntosh RA, Wellings CR, Park RF (1995) Wheat rusts: an atlas of resistance genes. CSIRO Publications, Victoria

    Book  Google Scholar 

  • McIntosh RA, Dubcovsky J, Rogers WJ, Morris C, Appels R, Xia XC (2011) Catalogue of gene symbols for wheat: 2011 Supplement (http://www.shigen.nig.ac.jp/wheat/komugi/genes/macgene/supplement2011.pdf). Accessed 7 Feb 2013

  • Nazari K, Ma WM, Yahyaoui A, Singh RP, Park RF (2009) Detection of wheat stem rust race (Puccinia graminis f. sp. tritici) TTKSK (Ug99) in Iran. Plant Dis 93:317

    Article  Google Scholar 

  • Niu Z, Klindworth DL, Friesen TL, Chao S, Jin Y, Cai X, Xu SS (2011) Targeted introgression of a wheat stem rust resistance gene by DNA marker-assisted chromosome engineering. Genetics 187:1011–1021

    Article  PubMed  CAS  Google Scholar 

  • Olivera P, Jin Y, Rouse M, Badebo A, Fetch T Jr, Singh RP, Yahyaoui A (2012) Races of Puccinia graminis f. sp. tritici with combined virulence to Sr13 and Sr9e in field stem rust screening nursery in Ethiopia. Plant Dis 96:623–628

    Article  Google Scholar 

  • Park R, Wellings C, Bariana HS, Bansal U (2009) Cereal rust report 2009. 7(2). http://sydney.edu.au/agriculture/documents/pbi/cereal_rust_report_2009_vol_7_2.pdf. Accessed 7 Feb 2013

  • Pretorius ZA, Singh RP, Wagoire WW, Payne TS (2000) Detection of virulence to wheat stem rust resistance gene Sr31 in Puccinia graminis f. sp. tritici in Uganda. Plant Dis 84:203

    Article  Google Scholar 

  • Pretorius ZA, Bender CM, Visser B, Terefe T (2010) First report of a Puccinia graminis f. sp. tritici race virulent to the Sr24 and Sr31 wheat stem rust resistance genes in South Africa. Plant Dis 94:784

    Article  Google Scholar 

  • Qi X, Stam P, Lindhout P (1996) Comparison and integration of four barley genetic maps. Genome 39:379–394

    Article  PubMed  CAS  Google Scholar 

  • Sears ER (1977) An induced mutant with homeologous pairing in common wheat. Can J Genet Cytol 19:585–593

    Google Scholar 

  • Singh RP, Hodson DP, Huerta-Espino J, Jin Y, Njau P, Wanyera R, Herrera-Foessel SA, Ward RW (2008) Will stem rust destroy the world’s wheat crop? Adv Agron 98:271–309

    Article  CAS  Google Scholar 

  • Stakman EC, Stewart DM, Loegering WQ (1962) Identification of physiologic races of Puccinia graminis var. tritici. Agricultural Research Service E617. United States Department of Agriculture), Washington DC

    Google Scholar 

  • Vleeshouwers VG, Raffaele S, Vossen JH, Champouret N, Oliva R, Segretin ME, Rietman H, Cano LM, Lokossou A, Kessel G, Pel MA, Kamoun S (2011) Understanding and exploiting late blight resistance in the age of effectors. Annu Rev Phytopathol 49:507–531

    Article  PubMed  CAS  Google Scholar 

  • Vos P, Hogers R, Bleeker M, Hornes M, Frijters A, Pot J, Peleman J, Kuiper M, Zabeau M (1995) AFLP: a new technique for DNA fingerprinting. Nucleic Acids Res 23:4407–4414

    Article  PubMed  CAS  Google Scholar 

  • Wanyera R, Kinyua MG, Jin Y, Singh RP (2006) The spread of stem rust caused by Puccinia graminis f. sp. tritici, with virulence on Sr31 in wheat in Eastern Africa. Plant Dis 90:113

    Article  Google Scholar 

  • Zhang P, Friebe B, Lukaszewski AJ, Gill BS (2001) The centromere structure in Robertsonian wheat–rye translocation chromosomes indicates that centric breakage-fusion can occur at different positions within the primary constriction. Chromosoma 110:335–344

    Article  PubMed  CAS  Google Scholar 

Download references

Acknowledgments

We thank the late Dr Paul Brennan, former Senior Wheat Breeder, Toowoomba, Australia, for initially suggesting Sr32-carrying germplasm as an objective for this research. We also thank Professor R.A. McIntosh (University of Sydney) for kindly providing the wheat-Aegilops speltoides translocation lines carrying Sr32 and critically reviewing the manuscript. We are thankful to Xiaodi Xia and Hanif Miah for providing excellent technical assistance and to T.T. The (University of Sydney) for producing some of the backcross materials. Research involving the isolation of the wheat–Ae. speltoides recombinants was funded by the Grains Research and Development Corporation of Australia through the Australian Cereal Rust Control Program and was previously associated with the CRC for Molecular Plant Breeding.

Conflict of interest

The authors declare that they have no conflict of interest.

Ethical standards

The experiments comply with the current laws of Australia.

Author information

Authors and Affiliations

Authors

Corresponding author

Correspondence to Rohit Mago.

Additional information

Communicated by T. H. Tai.

Germplasm requests should be addressed to I. Dundas.

Rights and permissions

Reprints and permissions

About this article

Cite this article

Mago, R., Verlin, D., Zhang, P. et al. Development of wheat–Aegilops speltoides recombinants and simple PCR-based markers for Sr32 and a new stem rust resistance gene on the 2S#1 chromosome. Theor Appl Genet 126, 2943–2955 (2013). https://doi.org/10.1007/s00122-013-2184-8

Download citation

  • Received:

  • Accepted:

  • Published:

  • Issue Date:

  • DOI: https://doi.org/10.1007/s00122-013-2184-8

Keywords

Navigation