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Fig 1.

Coptis chinensis.

A, plants; B, dried rhizome (Rhizoma Coptidis); C, carpels.

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Table 1.

Summary of the taxonomic history of Coptis, showing the main systems of classification.

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Fig 2.

Leaf diversity of Coptis.

A. C. trifolia; B. C. morii; C. C. chinensis; D. C. laciniata; E. C. aspleniifolia; F. C. japonica.

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Fig 3.

Floral diversity of Coptis.

A. C. trifolia; B. C. quinquefolia; C. C. morii; D. C. asplenifolia; E. C. laciniata; F. C. japonica; G. C. chinensis; H. C. deltoidea; I. C. omeiensis.

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Fig 3 Expand

Table 2.

Statistics from the analyses of the various datasets.

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Table 2 Expand

Fig 4.

Bayesian phylogram inferred from the combined plastid DNA and ITS data.

Numbers above the branches are Bayesian posterior probabilities. Tamura’s [19] classification is shown on the right.

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Fig 5.

The distributions for the SOWH test of the three alternative topologies.

The histogram shows the distribution of 100 replicates. The 1%, 5% significance levels and the observed log-likelihood difference are shown for each hypothesis in the chart (See text for details).

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Table 3.

Bayesian tests on the alternative hypotheses.

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Table 3 Expand

Fig 6.

The evolutionary reconstruction of selected morphological characters in Coptis.

Color-coded pie diagrams at each node show the relative probabilities of alternative ancestral states.

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Table 4.

Probability of observed pattern of correlated evolution between pairs of characters.

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Table 4 Expand